Hi @H1889
Thanks for sharing the history in the public space!
There is a known issue with the most current version of Funannotate, but the next recent has been working well for others. Please give this a try and let us know if it solves the issue for you as well or not.
Then, for Helixer, something else is going on. The tool is reporting that the work is exceeding memory but that can indicate a data problem as well. Fasta Statistics looks fine with your data, so I’m reviewing closer. Maybe we can bump up the resources we are allocating – using your example as a use case. More soon.
Hope this helps and we can follow up more of course! 