Issue with ColabFold?

Hello, I submitted several protein sequence for the ColabFold MSA on Saturday and none of it have yet to start (still greyed out). I’m wondering whether there is an issue with the tool itself or is the server just really busy because it usually completes within a day or two.

Hi @hkasey

It is hard to predict the timing. Has your job completed by now? Do you want to share back the history with the job so we can check with more specificity?

Thanks! :slight_smile:

XRef → ColabFold: GPU-accelerated protein structure prediction comes to UseGalaxy.org - Galaxy Community Hub

This is the job info

Job Information

Galaxy Tool ID toolshed.g2.bx.psu.edu/repos/iuc/colabfold_msa/colabfold_msa/1.5.5+galaxy1
Job State new
Command Line empty
Tool Standard Output empty
Tool Standard Error empty
Tool Exit Code
Job API ID bbd44e69cb8906b5deebfa79b277d01b

It’s still not running after almost a week.

Hi @hkasey

Our administrator just pushed this jobs to start – the queue is a bit new, and those may not have worked perfectly yet. Try to not delete these yet since he is restarting to test things a bit, and we can followup more here.