Job is waiting to run for over an hour

usegalaxy.org support
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1

Hi,

The FATSQC job has been waiting to run for a while and I am not sure why. I have added the link to my history below.

url: https://usegalaxy.org/u/nourmahfel/h/chip-seqfinal

1 Like
2

Same thing is happening for me, maybe it is something on their end.

1 Like
3

Same for me, I have 4 workflows in queue that seem to be stalled. Started them yesterday. Is there any way of knowing if galaxy offline? (Sorry, haven’t had this issue before.)

4

Same for me, both FastQC and bowtie2. Nothing has run for hours

5

I am experiencing the same problem. Jobs are queued up for almost 24 hours waiting to be submitted.

6

The most effective strategy is to queue up analysis jobs, then to let them complete.

  • Public servers are shared resources. Jobs will run when resources become available.
  • Queue and execution time depends on the tool and how busy the server is.
  • Please avoid deleting and rerunning jobs in hopes that they will run quicker. It has the opposite result: the new job is added back at the end of the queue extending wait time.
  • A wait of a few hours to a few days can be normal for computationally expensive tools.
  • :rocket: Tool forms and workflows include options to send yourself notifications by email.

Dataset Collections and Workflows are worth learning about.

  • Most Galaxy Training Network (GTN) tutorials include at least one associated Workflow to get your started.

  • Not sure how to use, create, import, or customize Collections and Workflows?

    Using Galaxy and Managing your Data

    A collection of microtutorials explaining various features of the Galaxy user interface and manipulating data within Galaxy.