Local installation of Galaxy


Dear all,
I recently installed Galaxy on Ubuntu.
No problem with the installation per se.
But I realize that most of the modules are not available at least in the main package.
Is there a way to download them and to install them aftewards?
For instance the section “Multiple alignement” is simply missing and the clustal W module is not available.

Thank you for your help.



Other important modules which are missing are all the “NGS …” modules (and more specifically the “NGS: QC & manipulation” one) and the FASTA manipulation module.

Thank you once again for your help.



and the NCBI Blast+ module…

Thank you


You can install tools of your choice into Galaxy you maintain. This tutorial is a good start https://galaxyproject.org/admin/tools/add-tool-from-toolshed-tutorial/