Hello! I am trying to run the most recent version of Metaphlan (4.0.6+galaxy2) with the --unknown_estimation parameter, but am receiving an error (photo attached).
Starting at the tool form, go to the Options menu and click into the See in Tool Shed link.
Let that completely load, then click into the Development Repository.
Start up an Issue ticket to report the problem to the developer. If you can include a very small shared history with an example that will help the author to reproduce the original problem, and to test the correction.
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Provide the small example here with a shared history.
A moderator will create the Issue ticket instead based on that example.
Thanks! Below is a link to a history I created with two sample files (forward and reverse reads) and my attempt at using the unknown_estimation option in Metaphlan.