adding tools 'SnpEff download' and 'SnpEff eff' on usegalaxy.eu

usegalaxy.eu support
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1

Dear admins,

Is it possible to have the ‘SnpEff download’ and ‘SnpEff eff’ tools installed on usegalaxy.eu (similar to what is already on usegalaxy.org)?
I am tailoring a workflow for publication and it would be really useful to be able to run it all using the EU Galaxy server which is faster and more reliable for me than the US one.

Thanks.

2

Hi,

both tools are actually installed, but the search is very sub-optimal. We hope to fix this with the next version of Galaxy.

For the meantime, please use:

https://usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_download
https://usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff/

Thanks,
Bjoern

3

Hi,

That’s great, thanks for the links!