Bracken database missed

usegalaxy.eu support
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1

Please, I need some help.
When I looked for a Kraken2-compatible database for Bracken, I couldn’t find one.

By the way, the database is:

“Prebuilt Refseq indexes: core_nt (Very large collection, inclusive of GenBank, RefSeq, TPA and PDB) (Version: 2024-09-04 - Downloaded: 2025-01-04T202436Z)”

Could you add a proportional one for Bracken?
Thank you very much!

2

Hi @Carlos-Santos

Thanks for the request! The core_nt database is brand new and pending addition to more tools.

We are tracking this update in another topic, so let’s combine these to keep it simple and in one place. :slight_smile:

Merged into →

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