Update: Did fine one problem with the default Conda venv
method (and there could be others!) – loading a fasa dataset into an IGV local browser fails, for some dependency (possibly Samtools
but that is just a guess!).
Discovered during this Q&A: Local IGV with Galaxy doesn't work
Even people with administrative experience will start over and use the Python venv
rather than attempt to fix the various issues that can come up when using a Conda venv
.
So – it is definitely recommended to use a Python venv
to avoid unnecessary issues.