Error with twoBitToFa tool

Hi everyone,

I am trying to use the twoBitToFa tool, but I am getting this error message.

twoBitToFa: error while loading shared libraries: cannot open shared object file: No such file or directory

According to the information that I have found on Internet about this error, the program was apparently compiled against a version of MySQL downloaded from; which is not available in Debian, which which coincidentally is the operating system on which the Galaxy instance is running on (Debian 9.7).

How could I solve this problem?

Thanks in advance.

1 Like

Hi @jvdlrm

Iā€™m not sure which version of the Galaxy wrapper you are running, but this is the most current from the IUC

Installed from the ToolShed with dependency management enabled, the containerized job environment should work regardless of the underlying OS.

That said, if you think there is a tool wrapper problem, it can be vetted first at Gitter here or directly reported here