I am working with the MicroRNA differential expression and tested the “Differential abundance testing of small RNAs” tutorial but it was corrupted in many ways.
I even tried with the tutorials own data. but still no result.
you can see the problem in steps such as : Converting bam to fastq, manipulate fastqc and the whole Hands-on: Hierarchical alignment to rRNA and miRNA reference sequences (3) step.
So anyone figure out what is the problem /.?