I am unable to install any tools using Galaxy as all tools get stuck on the cloning step. How do I check my Galaxy version? I probably need to re-install the entire package, which I now have installed locally. I tried to install featureCounts.
The error log had the following errors:
Internal Tool Error log
Time Phase File Error
2019-01-15 15:50:19.681933 Tool Loading ./tools/phenotype_association/sift.xml [Errno 2] No such file or directory: ‘/home/myname/galaxy/tool-data/sift_db.loc’
2019-01-15 15:50:19.679163 Tool Loading ./tools/evolution/add_scores.xml [Errno 2] No such file or directory: ‘/home/myname/galaxy/tool-data/add_scores.loc’
2019-01-15 15:50:19.677676 Tool Loading ./tools/evolution/codingSnps.xml [Errno 2] No such file or directory: ‘/home/myname/galaxy/tool-data/codingSnps.loc’
This is very frustrating, since I am installing all dependencies.
Any help would be appreciated. I do have an older local version.