I keep getting errors when trimming my data with Cutadapt. Please find the error below.
I ran exactly the same thing last week with the galaxy.org server and there it worked.
The server could not complete this request. Please verify your parameter settings, retry submission and contact the Galaxy Team if this error persists. A transcript of the submitted data is shown below.
{
“history_id”: “ff75df6a1c92239a”,
“tool_id”: “toolshed.g2.bx.psu.edu/repos/lparsons/cutadapt/cutadapt/4.0+galaxy0”,
“tool_version”: “4.0+galaxy0”,
“inputs”: {
“library|type”: “paired_collection”,
“library|input_1”: {
“values”: [
{
“id”: “72822dfb6c647067”,
“hid”: 21,
“name”: “Paired_List_NAPC2_FASTA”,
“src”: “hdca”,
“tags”: ,
“map_over_type”: “paired”
}
],
“batch”: true
},
“library|r1|cut”: “0”,
“library|r2|cut2”: “0”,
“library|r2|quality_cutoff2”: “”,
“adapter_options|action”: “trim”,
“adapter_options|internal”: “”,
“adapter_options|error_rate”: “0.1”,
“adapter_options|no_indels”: “false”,
“adapter_options|times”: “1”,
“adapter_options|overlap”: “3”,
“adapter_options|match_read_wildcards”: " ",
“adapter_options|revcomp”: “false”,
“filter_options|discard_trimmed”: “false”,
“filter_options|discard_untrimmed”: “false”,
“filter_options|minimum_length”: “20”,
“filter_options|maximum_length”: “”,
“filter_options|length_R2_options|length_R2_status”: “False”,
“filter_options|max_n”: “”,
“filter_options|pair_filter”: “any”,
“filter_options|max_expected_errors”: “”,
“filter_options|discard_cassava”: “false”,
“read_mod_options|quality_cutoff”: “20”,
“read_mod_options|nextseq_trim”: “0”,
“read_mod_options|trim_n”: “false”,
“read_mod_options|strip_suffix”: “”,
“read_mod_options|shorten_options|shorten_values”: “False”,
“read_mod_options|length_tag”: “”,
“read_mod_options|rename”: “”,
“read_mod_options|zero_cap”: “false”,
“output_selector”: [
“report”
]
}
}