Lefse Cladogram isn't complete -- http://huttenhower.sph.harvard.edu/galaxy/

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Hi folks,

Im new to Galaxy and im running lefse to compare to class(symptomatic and asymptomatic). I get a good differential abundance Lefse results but when plotted, the cladogram looks incomplete(attached). I am not sure why it isn’t showing multiple levels as is usual cladogram.

I would appreciate any assistance.

Regards.

Arunrr

Galaxy37-D)_Plot_Cladogram_on_data_34
Galaxy37-D)_Plot_Cladogram_on_data_341200×900 261 KB

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I am experiencing the same problem. I would appreciate if anyone could help me with this issue.
My cladogram looks like this:

image
image1440×1332 531 KB

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Hi @LenaLapi & @arunrr

This tool is unique to a domain-specific public Galaxy server.

Please see this topic for more details:

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@LenaLapi @arunrr can you maybe try Lefse here and let me know if this is a problem as well. I can look there in the logfiles easier.