Pictures of lefse on line has incomplete display

1

Dear Galaxy Community,
I have recently doing LefSe analysis on line. Now i am facing a problem. The output picture of the lefse is incomplete. To avoid such problem, do I need to set some parameters in LefSe or anything else?

image

Thanks for your kindly help.

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2

Hi - This may sound simple, but the graphic may be too large to display in the middle panel of the default Galaxy “Analyze Data” tab’s view.

Would you try displaying the browser window larger on your computer or hiding the right and/or left panel (there is an arrow at the bottom on each side to toggle show/hide) to see if that resolves the issue?

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Hi. Thank you for your kindly reply. I tried to increase the value of “width of the plot” in “Set some graphical options to personalize the output”. This could work. Thanks again.

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4

Hi-I meet a similar problem. There are over 100 abbreviating the labels in fact. However in the picture (both online picture and downloaded picture) of cladogram, there are only about 20 abbreviated labels in the legend. How can I get a unbroken legend? Or where can I find the taxonomic name of every abbreviated labels?

Thanks for your kindly help.

image
image919Ă—669 207 KB

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Sorry, I didn’t get many labels as you. I adjusted “Ration of the horizontal space to be given to the right side (for adjusting for label legend)” in “Set some graphical options to personalize the output”, and got a whole figure.

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