NCBI+ blastp and GALAXY_SLOTS - increase number of threads

[jennaj]

Hi @prao123

I cross-posted your question over to the Admin chat. They may reply here or there, and feel free to join the chat. You're invited to talk on Matrix

Meanwhile, the tutorials may also help, along with this recent Q&A.

Increasing cores

Hi, you can find the resources here: tpv-shared-database/tools.yml at main · galaxyproject/tpv-shared-database · GitHub which is shared across Galaxy instances and then local overwrites for EU here: infrastructure-playbook/files/galaxy/tpv/tools.yml at master · usegalaxy-eu/infrastructure-playbook · GitHub ${GALAXY_SLOTS:-1} is a bash syntax and just states that if the environment variable GALAXY_SLOTS is not set, then default to 1 core. We do set GALAXY_SLOTS with the values given in the linked resources files. What is your scientific question you want to answer? There might be a better way to solve your problem that does not involve mafft. Ciao, Bjoern

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