I used STAR to analyze the paired-end reads and then STAR-fusion with the chimeric junctions file from STAR to detect fusion transcripts. The K562 SRA file from NCBI is used for the test run. The reference genome, GTF file and BLAST+ result file are all obtained from CTAT-RESOURCE-LIB. The galaxy ru…

No output of STAR Fusion in galaxy

jennaj September 21, 2022, 11:19pm 2

Topic		Replies	Views
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RNA Star and MultiQC against imported genome multiqc , transcriptomics , cutadapt	3	568	January 11, 2022