problems with vcftools merge command

Hi all,
I’m writing to you for an issue on vcftools merge tool. I’m trying to performe the merge of two vcf files with bcftools merge, and the tool seems to work; however, when open the resulting merged vfc file, I see the genomic positions, but NO the geniotypes and info related to the specific vcf files;

How can I solve the the problem and have a merged corrected file?
thank you in advance for your help

Hi @Paola_Orsini,

sorry for that question, but you have tried to scroll over to the right in that window. Have to ask this because I do not understand what you’re trying to show with that screenshot.


1 Like