I have installed Galaxy on SUSE Linux Enerprise v15.1. If I go to the admin page and select “Install and Uninstall” under the Tool Management section of the menu on the left-hand side I get the following error:
Invalid server response. HTTPSConnectionPool(host=‘toolshed.g2.bx.psu.edu’, port=443): Max retries exceeded with url: /api/categories (Caused by SSLError(SSLError(1, ‘[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed (_ssl.c:852)’),)).
I have been unable to determine if the certificate that is not being verified is from the toolshed site or if the toolshed site is not verifying out certificate. Strangely enough we can successfully display the toolshed site in a browser on the VM. Other tests with curl and python have been able to connect to the site without error.
The script inside Galaxy that seems to generate the error is in scripts/tool_shed/api/create_categories.py.
Is there some configuration required in order to connect to external tool shed sites?
Any help on debugging this problem would be appreciated.
Thanks in advance.