Trinity, transcriptome assembly

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#1

Here’s a random question. If some bacterial RNA-SEQ data was assembled with Trinity, the same RNA-SEQ data can be aligned with the obtained transcriptome assembly and read the expression level?

I mean as a concept, not what tools I can use.

Thanks!

#2

Hi @Sammy,
sure, it has sense. Indeed there is an under-development training in Galaxy on this approach.

Regards

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