Hello, I am new to fungal de novo assembly, new to ABySS, and its been many years since I’ve used Galaxy Main but I’m starting a new chapter in my thesis and de novo assembly of fungal genomes will be at the core. I started by downloading three paired-end fastq files from NCBI SRA and ran them thro…

ABySS fungal de novo genome assembly: Update, ABySS removed from usegalaxy.org, alternative usegalaxy.eu

jennaj January 13, 2021, 12:47am 2

Update

The assembler ABySS has been technically problematic at UseGalaxy.org for some time now.

The tool has been removed from UseGalaxy.org.

An alternative usegalaxy.* server for this tool is UseGalaxy.eu

Unable to run Unicycler or ABySS

error message when doing de novo assembly

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