Issues with Read Assembly Using MEGAHIT and metaSPAdes in Galaxy

1

Hello

I’m currently working on assembling shotgun metagenomics reads from 13 FASTQ samples, but I’m encountering some issues with both MEGAHIT and metaSPAdes. I’d appreciate any guidance or troubleshooting tips!

2

Hi @Abdul_Latif_shamozai

what issue do you have? Can you share some histories with us or an error message?

Cheers,
Bjoern