% coding, number of genes, and number of protein-coding genes

1

Hello colleagues,

I have an unknown bacterial genome and I recently assembled contigs using SPAdes -meta. Then, I reordered the contigs using MAUVE. So, I know have a fasta file that has ordered contigs.

I would like to use Galaxy to determine three simple things:

  1. % coding (I have read average for bacteria is 88%)
  2. number of genes
  3. number of protein-coding genes

What may be some simple steps to determine any of these three goals using my ordered contigs file? Thank you for sharing your knowledge.