Help with interpreting GO enrichment resutls using goseq

,
2

Hi @ding66

Compare this:

  1. List of genes with the true/false
  2. Your “The GO annotation file that I uploaded to goseq” file
  3. Do both use the same gene ID format?

If there is a mismatch, that is likely the problem. You would need to adjust the file in step 2 above to match your existing list of genes from step 1. A “replace” tool could do that if you can find the mapping. Data Manipulation Olympics

I might be guessing wrong, but you can share all the inputs and we can look at this closer.