How do you manage 100 RNA seq files?

usegalaxy.org support
1

Dear all,

New to galaxy. I have done all the tutorials which are great by the way. I have 120 RNA seq files, bacteria treated with different drugs and times points all done in triplicate. How do I manage and find all the files. Files have been uploaded and ready for processing and analysis. Any tips or advice would be awesome. Thanks

Nham

2

when you have many samples that need to go through the same pipeline you generally want to use dataset collections (Using dataset collections) and workflows (https://training.galaxyproject.org/training-material/topics/galaxy-interface/tutorials/workflow-editor/tutorial.html)