I used the RUVseq to my data, and obtained table which looks like this:
identifier condition W_1 Counts_s1.tabular Cont -0.343905680583747 Counts_s2.tabular Cont 0.581535965604329 Counts_s3.tabular Cont -0.285812794268053 Counts_s4.tabular Treat -0.25027199487464 Counts_s5.tabular Treat -0.271891634519469 Counts_s6.tabular Treat 0.570346138641578
How can I use it in the subsequent analysis in EdgeR, Limma-voom or DEseq2 in Galaxy? If I just use this table as “design” file, it doesn’t work.
Thank you a lot in advance!