Hi, i am new to galaxy. Could you please explain what is used as reference transcriptome and how to search it. I want to see transcriptome abundance of oryza sativa species
This FAQ covers the content and format details for fasta reference transcriptome and GTF/GFF reference annotation (for most analysis, not just DE). https://training.galaxyproject.org/training-material/faqs/galaxy/analysis_differential_expression_help.html. Please let us know if anything is not clear and we can try to help more.
Thank you. I want to know what is used as reference transcriptome?
Did you review the FAQ? It has all the details about what data that file represents, the format details, and how it relates to your other inputs.