I am following the training "Clustering 3K PBMCs " by Bérénice Batut et al. to learn how to do the single cell RNA seq analysis. I was stopped at the step “filter with Scanpy”. Everytime I got the message “error,
An error occurred with this dataset:. This job was resubmitted to the queue because it encountered a tool detected error condition on its compute resource.” The dataset imported (the 3K PBMC data in h5ad format) was totally Ok, because I checked it with the tool “inspect AnnData”.
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Hi @hliu96501,
this problem is being fixed currently; this tool will be available for the next week.
Regards