Trinity taking long time?

usegalaxy.eu support
#1

Hi, I’m running a paired-end de Novo assembly with Trinity. Inputs are 2 fastq (7 gb each) for forward and reverse ends, with 31 million reads of same long.
The Trinity step in my history started running a few more than 48 hs ago. Is this too long? May I clean an rerun?
History link:

https://usegalaxy.eu/u/rivero.alexander/h/srr59

Thanks in advance.

#2

Trinity uses a lot of resources and usually runs for very a long time. So, nothing unusual here.

1 Like
#3

Thanks you, it is my first time using the platform and the tool, good to know that info!