Data paused and keep getting error: Tophat RNA data -- Tophat/Tophat2 Deprecated, use HISAT2

[jennaj]

Hello @ajisa_ali

The tools Tophat and Tophat2 have been deprecated for many years. HISAT2 is the replacement.

To learn more about current Transcriptomics methods and tools, please see:

@jennaj

Galaxy Training Network Tutorials : Some GTN tutorials are appropriate for Galaxy Main and some are not. Where you can run each is noted per tutorial – click on the Galaxy instances gear icon to review the Public Galaxy server choices. If a tutorial is supported by a pre-configured Galaxy Docker training image, instructions for how to get it will be listed below the tutorial listings, per category.

Thanks!