Does galaxy has any thing in "GET DATA" to download FASTA reference transcriptome ?


i need human refrence fasta transcriptome, i know i can download it Manuely but is there any thing in GETDATA to find it ?

1 Like

There are no custom “Get Data” tools for this. Using Upload is the best option (URL, or use FTP for large datasets you might have locally). Please be aware that tar and zip archives cannot be loaded – these need to be uncompressed locally first, then have the individual files uploaded.

The UCSC Table Browser (tool UCSC main) does host transcriptome data, but the output would likely be truncated – only about 100k lines are served per query from that source (sent to Galaxy or otherwise).