ExomeDepth datasets

Why the tool doesn’t recognize the bam dataset, it puts me that it’s unavailable

Welcome, @Ricardo_Chinchilla

Things to check

  • Does dataset you want to use have the bam datatype assigned? The tool form lists out the expected datatype of the inputs under “Accepted formats”. When those “match” datasets in the history, those data become available as an input for that field.

Screen Shot 2024-04-30 at 9.14.59 AM

  • If the data are inside a collection folder, click on the folder icon so the select field is looking for the correct data shape.

Select an individual dataset
Screen Shot 2024-04-30 at 9.12.35 AM

Select a collection folder of datasets
Screen Shot 2024-04-30 at 9.12.48 AM



Please give that a review and let us know if it helps. :slight_smile:

You are welcome to share some screenshots if you need more help. Try to capture the tool form and your data in the history with all of the metadata shown (expanded datasets).