How can I suppress uniditified ITS sequences in FROGS for Phyloseq analysis
Hello @mcornet
I don’t think that FROGS has been wrapped for Galaxy yet, but could be wrong!
Where are you using the tool? If you can share an example, we could help to check if the wrapper has an option for this enabled or not.
The other solution (guess!) would likely be to custom filter the output after running the primary tool.