After running DESeq2 on counts datasets, how can we extract the differentially expressed genes (the “red points” of the MA-plot) ? I am trying to see if some specific genes with sequences I know are part of these genes.
Related topics
| Topic | Replies | Views | Activity | |
|---|---|---|---|---|
|
Deseq normalized values and RNA seq analysis
|
0 | 308 | April 1, 2020 | |
| RNA Seq analysis - DESEQ2 no significative p-value/log2(FC) | 1 | 345 | July 16, 2023 | |
|
Question: DESeq2 Fatal error
|
0 | 606 | March 27, 2020 | |
|
Deseq2 Biological v. Sequencing replicates
|
0 | 323 | March 4, 2021 | |
|
problem with running Deseq2
|
0 | 286 | February 12, 2021 |