we love phageterm and use it all the time but can’t find it on galaxy anymore.
Which Galaxy server were you using the tool at before? URL or describe if other.
Why I’m asking: each server decides on their own which tools to host, and the UseGalaxy servers don’t remove older tools, even “broken” tools, unless there is a compelling reason. This tends to be a licensing issue or related and the general solution is to host the tool in a private Galaxy server after obtaining a license.
Let’s start there