I am an admin of a Galaxy instance created by the organization I work for. Recently, we connected the Galaxy instance to the local HPC. I have created workflows using tools installed in the local galaxy. However in HPC, for each of the tools, I have to write a script for each individual tool and specify the path to each tool’s location within the local HPC. It is a little cumbersome and sometimes the errors it outputs are difficult to understand. Is there another way to install tools in the local HPC that is the same tool in the local Galaxy instance? Any help or suggestions are appreciated!
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