I have uploaded two fastq.gz files (1.7GB each) to Galaxy this past Tuesday for de novo transcriptome assembly with Trinity. However, the job is still waiting to run.
Is there a long queue for Trinity or is there any problem with the server? I’ve noticed that sometimes the website is unreachable.
Jobs that are queued should start up again on their own. Any jobs that fail (for any reason during this time frame) should be rerun. See the post above for more details.