Troubleshooting Issue with hicBuildMatrix Tool for Analyzing HiC Data

Hi, I attempted to analyze HiC data using hicBuildMatrix, but it seems that the tool isn’t functioning properly. It remains stuck in the “waiting to run” status indefinitely. Does anyone have a solution to this issue or know how to report it?


Hi @Sheng-Chieh_Hsu Let’s combine both questions into the other thread here hicBuildMatrix seeting for restriction cut file or a bin size

If you want to explain more about waiting-to-run status I would be interested. Please post that in your other topic. We’ll need to know where you are working, and the job details. See the banner at the top of the forum for how to share your work for feedback, or see here directly How to get faster help with your question.