Upload data error -- at huttenhower.sph.harvard.edu/galaxy/

[jennaj]

Update 3/15/2022

The Biobakery Lab that hosts this Galaxy server wrote back that the Upload functionality at the server is now functional. Please try now. Thanks!

---

Hi all,

It sounds like most of you are working at this public Galaxy server: http://huttenhower.sph.harvard.edu/galaxy/

A different version of Lefse is available as an alternative at: UseGalaxy.eu, UseGalaxy.org, and UseGalaxy.org.au.

If you need to work at the Huttenhower public Galaxy server, please know that server’s administrators do not track this forum. We can sometimes help with tool errors and related issues, but it does seem that the Upload tool is non-functional from my testing, and we cannot correct it or give any status here.

The administrators of that server will need to be contacted directly about the problems with the Upload tool at that server. Contact details are below, and if anyone gets an update, please feel free to post it back to this thread. I didn’t find any notifications on their Galaxy server or at their forum.

General info:

@jennaj

The tool you are using is specific to the http://huttenhower.sph.harvard.edu/galaxy/ domain-specific public Galaxy server.

The tools and protocols hosted there differ significantly from the Lefse tools hosted at most other public Galaxy servers (including usegalaxy.* servers).

The administrators of that particular public Galaxy server do not track this forum. Instead, contact them directly, after double-checking your protocol and inputs against the help/tutorials they offer (below).

• Contact: Huttenhower Lab

Help/tutorials: (also linked from the server’s home page, with example data available):

• lefse – The Huttenhower Lab
• lefse · biobakery/biobakery Wiki · GitHub

Prior Q&A and other related resources including other versions of this tool and different tools that may be helpful when working with this type of data:

• Lefse Cladogram prior Q&A at this forum: Search results for ‘Cladogram’ - Galaxy Community Help
• All Galaxy resources: Searching the Galaxy