I was running RNA STAR with 68 samples in the collection. Out of them, 4 got errors. When I rerun them it’s fine and it gave results, but the result came separately and not within the collective result. Now I can not run the collective result to feature count as there contain some files with error. Also I tried to take individual bam files from collection to separate history and run the featurecounts, but I can not drag individual .bam results from collection. Any help?
Thank you
Kudzu
Hi @kudzu,
could you share your history with me? I’ll have a look at it, since it seems to be a bug in the tool.
Regards
Hi @kudzu
The same thing happened to me - I had to re-run the entire RNA STAR on that same collection again and the 2 samples that were giving me errors ran absolutely fine the second time around
Not an ideal solution - but just to let you know I had the same problem and it fixed it for me!
Thanks,
Marianne