I have been using MultiCovBed occasionally. Lately it simply doesn’t work regardless of the files loaded (ERROR: Unrecognized parameter: -f , although I used the default).
While several weeks ago the versions used were:
|Galaxy Tool Version:|184.108.40.206|
|Tool Version:|bedtools v2.27.0|
Now it states:
|Galaxy Tool Version:|2.27.1|
|Tool Version:|bedtools v2.16.1|
Seems like an updated version of Galaxy Tool (2.27.1 vs 2.27.0) uses a downgraded version of bedtools (2.27.0 vs 2.16.1)
How can I overcome this and run the tool without an error just as before?