Dexseq stuck on 'Installing tools dependencies' on local instance of Galaxy

Hello - complete n00b here so hopefully its something very quick.

I am running a local instance of Galaxy 22.05 on Ubuntu.

I’ve managed to set up the instance, become admin and install some tools from the toolshed (RNA-star, edgeR, featurecounts) without any issues (they are all running fine).

However, when I try to install ‘Dexseq’, I seem to run into an issue where it is stuck on ‘Installing tool dependencies’. I don’t see any obvious error message but this is the output from Terminal (just keeps repeating this with new values of 127.0.0.1:X.

uvicorn.access INFO 2023-03-02 07:34:46,163 [pN:main.1,p:5583,tN:MainThread] 127.0.0.1:54370 - "GET /api/tool_shed_repositories/?uninstalled=False HTTP/1.1" 200
Suvicorn.access INFO 2023-03-02 07:34:51,184 [pN:main.1,p:5583,tN:MainThread] 127.0.0.1:36840 - "GET /api/tool_shed_repositories/?uninstalled=False HTTP/1.1" 200
uvicorn.access INFO 2023-03-02 07:34:56,201 [pN:main.1,p:5583,tN:MainThread] 127.0.0.1:36842 - "GET /api/tool_shed_repositories/?uninstalled=False HTTP/1.1" 200
uvicorn.access INFO 2023-03-02 07:35:01,217 [pN:main.1,p:5583,tN:MainThread] 127.0.0.1:37582 - "GET /api/tool_shed_repositories/?uninstalled=False HTTP/1.1" 200
uvicorn.access INFO 2023-03-02 07:35:06,235 [pN:main.1,p:5583,tN:MainThread] 127.0.0.1:37596 - "GET /api/tool_shed_repositories/?uninstalled=False HTTP/1.1" 200
uvicorn.access INFO 2023-03-02 07:35:11,255 [pN:main.1,p:5583,tN:MainThread] 127.0.0.1:56610 - "GET /api/tool_shed_repositories/?uninstalled=False HTTP/1.1" 200
uvicorn.access INFO 2023-03-02 07:35:16,273 [pN:main.1,p:5583,tN:MainThread] 127.0.0.1:56622 - "GET /api/tool_shed_repositories/?uninstalled=False HTTP/1.1" 200
uvicorn.access INFO 2023-03-02 07:35:21,287 [pN:main.1,p:5583,tN:MainThread] 127.0.0.1:58406 - "GET /api/tool_shed_repositories/?uninstalled=False HTTP/1.1" 200

I have re-installed and restarted Galaxy several times and its a no-go.

Any help appreciated !

Hello @Mehul_Vora

If you still need help, please start here: Galaxy Training!

Full docs are here, including dependency handling topics: Releases — Galaxy Project 23.0.1.dev0 documentation

2 posts were split to a new topic: Local Galaxy tool install troubleshooting