Hi, I am using Circos and trying to make tile 2dplot. My ideogram is mm10. Everytime I execute the job I can just visualise ideogram with no 2D plot.

Hi @akankshabafna There is likely a format/naming problem with the data provided for the “2D Data Tracks” input. The tutorial here provides many examples with sample data, and should help to find the problem: Visualisation with Circos The Circos tool form also has some tips: “No data or plot cr…

Circos Tiles plot

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jennaj Split this topic October 14, 2022, 9:51pm 3

2 posts were split to a new topic: Circos “colorExact” error

Topic		Replies	Views
Circos: transparency of fill color in tiles circos	4	275	October 2, 2023
Circos functional on usegalaxy.eu, but not usegalaxy.org: Pending updated tool install at org usegalaxy.org support tool-install , server-open-issue	1	419	November 3, 2021
Circos - can't call method "colorExact" error usegalaxy.eu support troubleshooting , circos	2	291	April 20, 2023
Circos - heatmap - viridis circos , tool-help	7	72	September 12, 2024
Creating Circos cytogenic band data usegalaxy.org support	1	407	November 11, 2020

Circos Tiles plot

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