There is no Uniprot Swissprot database in Diamond

1

I am trying to use Diamond alignment tool for short sequences against a protein database. As the title suggests, when I click on the “Select a reference database” there are only options for the NCBI NR and RefSeq. Underneath is the message “If your database of interest is not listed, contact your Galaxy admin”.

Since I do not know how to contact Galaxy admin, I am submitting here. I hope someone can help or at least alert someone if this is something that can be done.

Thanks in advance!

2

Hi @mateoc,
which Galaxy instance are you using?

Regards

3

Hi @gallardoalba,

I am working on usegalaxy.eu if that’s what you are asking.

Regards

1 Like
4

Thanks, I have informed the system administrator about that.

Regards

5

Hi @mateoc,
the database is now available.

Regards