I am trying to analyze bulk RNA sequencing data. I ran feature counts, deseq2, and when I try to run annotate deseq2 it comes up with this error /bin/bash: warning: setlocale: LC_ALL: cannot change locale (C.UTF-8). I can visualize the output of annotated deseq2 in preview, but I cannot do anything with this in galaxy. How could I fix this? thanks for your time.
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Welcome @jhieronymus
Would you be able to set your history to a shared state, then capture the URL for your job details view and post that back? Or you can share the entire history. 
I’d like to confirm if your issue is the same as this issue → Annotate DESeq2/DEXSeq tool error - #6 by igor
You may have also had a job that was run when this issue was still present (I thought it was resolved but that’s also what we are confirming) → Annotate DESeq2/DEXSeq output table error
Thanks!
Please try again now and thanks for reporting the issue!