I am trying to upload .gff3 file is is uploading and can be visible in history but I am trying to map my fastq file to a reference genome with build index with gene model but there no dataset is available (though the .gff3 file is visible in history)
Welcome, @Baikunth_Dwivedy
You will be using both the genome and annotation from the history – so toggle that option right above the blue box in your screenshot to the setting that matches your data.
Also, the tool form is not able to recognize the GFF3 dataset in your history for some reason.
Check this:
- The history with the dataset is the active history
- You data in dataset 56 is in GFF3 format (the file content itself) and that is has that datatype assigned
FAQs