Hi everybody, i was asking how select a reference genome different to that already present in the option of RNA STAR. Thank you for your help!

Hi, If I understand it correctly, you want to use a genome fasta file that is not available as a built-in genome. If that is the case, you can change Custom or built-in reference genome to use reference genome from history and create temporary index option. Then, using the Select a reference genome,…

How to select a different reference genome from that already present using the tool RNA-STAR

usegalaxy.org support

jennaj February 10, 2025, 11:59pm 3

XRef Custom genome + custom build: How to use a genome that is not natively indexed at the server you are working at

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How to select a different reference genome from that already present using the tool RNA-STAR

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