Galaxy Community Help

Topic	Replies	Views	Activity
I attempted to run LOTUS2 on the Galaxy server multiple times, but the job failed usegalaxy.org support devops-administration , gtn-tutorial , metagenomics	1	40	March 17, 2025
Gemini database installation crash devops-administration , galaxy-local	6	75	March 17, 2025
galaxy training - Calling variants in diploid systems gemini annotation source unavailable usegalaxy.be support gemini , tool-help , variant-analysis	8	130	March 15, 2025
Request to update BLASTP nr database usegalaxy.eu support reference-index , blastp	5	92	March 14, 2025
Missing gene id labeling in limma usegalaxy.org.au support limma_voom	16	205	March 14, 2025
Setting up a galaxy instance - admin issues	1	52	March 14, 2025
Getting NCBI Reference genome indexed for tools: custom genome, reference genome, reference annotation reference-index , custom-genome , reference-annotation , reference-genome , featurecounts , reference-transcriptome	10	185	March 14, 2025
Two Unipept tools - which one to use? usegalaxy.eu support tool-panel	1	38	March 14, 2025
Case-sensitive Select tool? usegalaxy.eu support text-manipulation , tool-help , grep1 , select	3	59	March 13, 2025
Is possible to disable web interface of galaxy? devops-administration , galaxy-local	2	41	March 13, 2025
Galaxy bioinformatics API KEY expires? devops-bioblend-api	4	70	March 13, 2025
Snpeff database run errors usegalaxy.org support tool-help , snpeff , snpeff_build_gb	3	162	March 13, 2025
Introductory Tutorial Genomics & Galaxy: Error on Overlapping Intervals usegalaxy.org support gtn-tutorial , troubleshooting	3	59	March 13, 2025
VGP decontamination usegalaxy.org support vgp	4	261	March 13, 2025
How to solve problems with data formats: GTN Data Manipulation Olympics tutorials! Resources text-manipulation , troubleshooting , resources , tool-help , edger , gtn-olympics	2	121	March 13, 2025
The access to practical session in Galaxy usegalaxy.org.au support gtn-tutorial	3	49	March 13, 2025
Duplicates in MAGeCKs test tool-help , crispr , mageck_test , mageck_count	5	161	March 12, 2025
Snpeff Eff tool not loading the graphs in HTML view usegalaxy.org support visualization	1	47	March 11, 2025
Setting up temporary storage on a private Galaxy instance devops-administration	4	78	March 11, 2025
Hisat2 long runtime queued-gray-datasets	1	47	March 10, 2025
SPADes and MEGAHIT memory issues usegalaxy.org support exceeds-memory-error	1	102	March 10, 2025
Resolving memory failures with SPAdes Resources spades , exceeds-memory-error , resources , tool-help	1	162	August 27, 2024
SPAdes error -- running out of memory/not enough memory allocated for job Resources spades , exceeds-memory-error , resources	1	632	June 6, 2024
How do I report a bug in a tutorial usegalaxy.eu support gtn-tutorial	1	28	March 10, 2025
Illumina fastq (pair-end) file conversion to fasta file usegalaxy.be support troubleshooting	2	79	March 7, 2025
Protein domain and motif identification usegalaxy.eu support text-manipulation , igv , genome-annotation , interproscan	1	47	March 7, 2025
protein sequence usegalaxy.eu support text-manipulation , igv , genome-annotation	1	40	March 7, 2025
Error Installing tusd via Ansible: HTTP Error 404 for v2.7.0 devops-administration , galaxy-local	3	83	March 6, 2025
goseq error in length and/or count files? usegalaxy.eu support troubleshooting	3	52	March 5, 2025
Datasets error and failure in DE analysis for mirna-seq troubleshooting , mirna	1	47	March 5, 2025