Manta SV error using reference genome

Dear all,
I’m facing with an error when I use Manta SV on bam files and my reference genome
The error is:
“Error running samtools faidx for Manta /usr/bin/env: ‘python2’: No such file or directory”

I was wondering if i can do something to overcame the error

Thank you in advance

Sounds like a problem with the tool install on Galaxy Europe. We’ll look into this (probably until Monday).

Thank you so much for the update

This particular error with Manta is now resolved.
Hope the tool is now usable for your purpose.

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