Reference geneome

Hi,

I am trying to analyse the RNA seq Data of Almond using the de novo assembly protocol. However, the protocol asks for referenc genome in several steps. I can’t find my reference genome of interest i.e almond geneome in the Galaxy referece genomes list. Please add this genome in the Galaxy list of genomes.
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/902/201/215/GCF_902201215.1_ALMONDv2/GCF_902201215.1_ALMONDv2_genomic.fna.gz

1 Like

Hi @susheel_raina

Please load the fasta and use it as a custom reference genome/build.

I added a tag to your post that points to prior Q&A that includes links to FAQs and other advice re formatting.

Also please see the tutorial here: Galaxy Training!

Thanks!