Galaxy Community Help

Topic	Replies	Views	Activity
What should I do if my data exceeds the given 250GB of storage? account , storage-dashboard , resources , manage-quota , scratch-space I’m working on a transciptomics data which will probably exceed the given 250GB data. Is there any possible solution to this? for example increasing my storage?	3	796	August 15, 2024
Troubleshooting resources for errors or unexpected results share-or-publish , troubleshooting , queued-gray-datasets , resources How to troubleshoot your work in Galaxy, and how to ask for help! :mag_right: Review your Job Details → inputs + parameters + logs using the i-icon inside of any dataset. :mortar_board: Learn with a tutorial and custom…	5	10556	April 17, 2024
Diffbind memory issues usegalaxy.org support	0	1	January 13, 2025
Problem on Picrust2 webtool, even with tutorial files. usegalaxy.eu support workflow , qiime2 , picrust	5	521	January 13, 2025
Issue with ColabFold? usegalaxy.org support	0	2	January 13, 2025
Correlation analysis multiomics	0	2	January 13, 2025
Issue with Opening Shiny Interactive Tool from Galaxy Interface galaxy-local	3	14	January 13, 2025
How to launch JupyterLab in my local galaxy server-admin , galaxy-local , interactive-tools	4	8	January 13, 2025
How can i prepare ASV table with the abundance and ASV?	0	2	January 13, 2025
Merge ASV table and taxonomy table in one file usegalaxy.eu support	1	521	January 13, 2025
VIBRANT reference data tool-help , vibrant	3	6	January 13, 2025
Downloading ASV table for microbial community network analysis metagenomics , microgalaxy	7	13	January 13, 2025
Krakentools output file is empty usegalaxy.org.au support tool-help	0	3	January 13, 2025
Global change in splicing usegalaxy.org support galaxy-local , transcriptomics , variant-analysis	2	7	January 11, 2025
Teaching an undergrad course for NGS data from QC, assembly to comparative functional annotation usegalaxy.org support	2	3	January 10, 2025
ClustalW tool and MSA sequence usegalaxy.eu support tool-help , clustalw	1	4	January 10, 2025
Result files were deposited in different storage (from 30-day storage to permanent storage) Resources storage-dashboard , resources , scratch-space	2	8	January 10, 2025
error: Job output file grew too large (greater than 200.0 GB) usegalaxy.org support tool-help	3	15	January 10, 2025
Manta tool not working tool-help , manta	1	3	January 9, 2025
Difficulty in using OrthoFinder troubleshooting	7	26	January 9, 2025
Feature count Fatal error: Exit code 255 () featurecounts	3	10	January 9, 2025
Disk Space Issue - Deleted Datasets Still Consuming Space storage-dashboard	1	3	January 9, 2025
MSMetaEnhancer can't reach services if running on usegalaxy.eu usegalaxy.eu support proteomics	5	136	January 9, 2025
[Errno 116] Stale file handle: '/corral4/main' at UseGalaxy.org Jan 8 2024 usegalaxy.org support tool-help , fastqc	4	12	January 9, 2025
MOB-Typer unstable results usegalaxy.eu support tool-help	10	21	January 9, 2025
MaxQuant error with experiment design template (tutorial) usegalaxy.eu support	7	30	January 9, 2025
Issue with "tool_conf.xml is None" despite it being present server-admin , galaxy-local	3	15	January 8, 2025
An error on Best assembly by N50-CFSAN SNP relabel-collection	5	12	January 8, 2025
Can't unpause job. usegalaxy.org support workflow , paused-jobs	3	5	January 8, 2025
UCSC Reference Genome and GTF Fatal Error no valid exons in the GTF file usegalaxy.eu support custom-genome , mapping , fastq-format-error , ucsc , rna-seq , featurecounts , fastq-format , rna_star	1	5	January 8, 2025

What should I do if my data exceeds the given 250GB of storage?

I’m working on a transciptomics data which will probably exceed the given 250GB data. Is there any possible solution to this? for example increasing my storage?

3

796

August 15, 2024

Troubleshooting resources for errors or unexpected results

share-or-publish , troubleshooting , queued-gray-datasets , resources

How to troubleshoot your work in Galaxy, and how to ask for help! :mag_right: Review your Job Details → inputs + parameters + logs using the i-icon inside of any dataset. :mortar_board: Learn with a tutorial and custom…

5

10556

April 17, 2024

Diffbind memory issues

usegalaxy.org support