Galaxy Community Help

Topic	Replies	Views	Activity
Troubleshooting resources for errors or unexpected results usegalaxy.org support Check to see if there is a known usegalaxy.* server issue. Server Status: https://status.galaxyproject.org/ If the server was down when you first ran your job, try a rerun once back up. A rerun can also eliminate tra…	1	7747	November 28, 2018
Welcome to Galaxy Community Help	1	3218	November 20, 2018
Timeout (504) : impossible to show toolshed categories admin , tool-install	2	16	September 21, 2023
Demultiplexing fastq file with barcodes	1	15	September 21, 2023
compare Galaxy europe aligners (bowtie2, BWA and minimap2) and CLC genomics workbench usegalaxy.eu support mapping	5	39	September 21, 2023
mm10 version rna star usegalaxy.eu support mapping	1	12	September 21, 2023
Troubleshooting BWA-MEM2 resources under Docker Galaxy mapping , galaxy-docker	1	18	September 20, 2023
I tried to run a new workflow but it stopped scheduling at some point... seems like a better error message is in order? usegalaxy.org support	4	69	September 20, 2023
Troubleshooting an error (exit code 1) when performing BWA-MEM2 on WGS data usegalaxy.org support custom-genome , troubleshooting , wgs , public-galaxy-server , bwa-mem	4	553	September 20, 2023
FROGS analysis and Phyloseq troubleshooting	1	16	September 20, 2023
I am running Galaxy 22.05 and trying to incorporate JmolEditor. I am getting the following error while trying to import the struture to Galaxy	1	12	September 20, 2023
galaxy-upload keyerror: update_time usegalaxy.be support upload	1	15	September 20, 2023
Exomedepth missing chromosome number in the output usegalaxy.org support troubleshooting	1	16	September 20, 2023
CSVLogger (callback) with Create deep learning model usegalaxy.eu support server-open-issue , machine-learning	7	80	September 20, 2023
Long waits at FASTP? usegalaxy.org support queued-gray-datasets	4	48	September 18, 2023
Job not running for past more than 24 hrs usegalaxy.org support queued-gray-datasets	2	30	September 18, 2023
Fastp not running: Confirmed job delays at UseGalaxy.org 09/23/2022. Solution: allow queued jobs to process usegalaxy.org support server-side-delay , queued-gray-datasets	10	401	September 18, 2023
Anyone know of a plant genetics forum? usegalaxy.org support admin , workflow , galaxy-local , public-galaxy-server	0	61	September 17, 2023
"From peaks to genes" error with UCSC Main usegalaxy.eu support troubleshooting , ucsc	5	49	September 15, 2023
Cannot analyze MD simulation using GROMACS - error 127 usegalaxy.org support tutorial , comp-chemistry	2	198	September 15, 2023
Rendering svg from galaxy troubleshooting	6	49	September 14, 2023
Using GOSEQ with a custom category input transcriptomics , goseq	6	35	September 14, 2023
How can I split a VCF file by chromosome? vcf , bcftools , vcf-filter	2	1589	September 14, 2023
SignalP output from InterProScan usegalaxy.eu support proteomics	2	30	September 14, 2023
Importing from USCS main table browser - invalid HTML content usegalaxy.org support server-side-error , ucsc	1	35	September 13, 2023
Jupyter interactive notebook unable to finish job error usegalaxy.eu support workflow , error , python	3	29	September 13, 2023
filtering a single-end fastq.gz collection by number of reads text-manipulation , collections	2	37	September 13, 2023
unable to load createor update apollo tool usegalaxy.eu support error	0	24	September 13, 2023
DeSeq2 or limma analyze paired data usegalaxy.org support transcriptomics	3	25	September 12, 2023
How to built CAT database when do for CAT annotation? metagenomics	1	23	September 12, 2023

Troubleshooting resources for errors or unexpected results

Check to see if there is a known usegalaxy.* server issue. Server Status: https://status.galaxyproject.org/ If the server was down when you first ran your job, try a rerun once back up. A rerun can also eliminate tra…